When I changed the fluid on my 06 LJ, I also had shifting trouble. It took much more ATF than was called for in the manual. If I remember, it was almost a whole quart more.When it was shifting hard, the fluid was toward the bottom on the stick, but still in normal range. I got on here and they suggested I add some more, so I did, pulling it at the top end of normal range. A couple miles down the road, things started smoothing out. No trouble now.
My question is, why do so many automotive fluids smell so damn bad? My nose is dreading the next due date.