I have a 97 TJ, auto, 4.0, air. I just got it back together after my daughter hit a tree. I had the battery out for 2 months while i worked on the frame/sheet metal. I put the battery back in and it fired up after a couple of cranks. The idle was good until it reached operating temp, then the idle when up and down and started running rough. It will do this pattern after sitting a couple of hours. It ran great before the tree and never had any issues. Any advice on where to start?